SEOUL NATIONAL UNIVERSITY

서울대학교
식품마이크로바이옴학 연구실

PUBLICATIONS국내

논문실적
130. You-Tae Kim, Joon-Gi Kwon, Daniel J. O’Sullivan  & Ju-Hoon Lee
Regulatory mechanism of cysteine-dependent methionine biosynthesis in Bifidobacterium longum: insights into sulfur metabolism in gut microbiota
Gut Microbes 2024
129. Ki-Nam Yoon, Yo-Han Choi, Gi Beom Keum, Seo-Joon Yeom, Sang-Su Kim, Eun Sol Kim, Hyun Ju Park, Jo Eun Kim, Jong-Heum Park, Beom-Seok Song, Jong-Bang Eun, Seung-Hwan Park, Ju Huck Lee, Ju-Hoon Lee, Hyeun Bum Kim & Jae-Kyung Kim 
Lactiplantibacillus argentoratensis AGMB00912 alleviates diarrhea and promotes the growth performance of piglets during the weaning transition
BMC Microbiology 2024
128. Jinok Kwak, Hyunok Doo, Eun Sol Kim, Gi Beom Keum, Sumin Ryu, Yejin Choi, Juyoun Kang, Haram Kim, Yeongjae Chae, Sheena Kim, Ju-Hoon Lee, Hyeun Bum Kim1
A Refined Comparative Mouse Model of Acute and Chronic Atopic Dermatitis
Journal of Animal Science and Technology 2024
127. Ki-Nam Yoon, Jihye Yang, Seo-Joon Yeom, Sang-Su Kim, Jong-Heum Park, Beom-Seok Song, Jong-Bang Eun, Seung-Hwan Park, Ju Huck Lee, Hyeun Bum Kim, Ju-Hoon Lee, Jae-Kyung Kim
Lactiplantibacillus argentoratensis AGMB00912 protects weaning mice from ETEC infection and enhances gut health
Frontiers in Microbiology 2024
126. Soo-Jeong Lee, Jihye Yang, Gi Beom Keum, Jinok Kwak, Hyunok Doo, Sungwoo Choi, Dong-Geun Park, Chul-Hong Kim, Hyeun Bum Kim, and Ju-Hoon Lee
Therapeutic Potential of Lactiplantibacillus plantarum FB091 in Alleviating AlcoholInduced Liver Disease through Gut-Liver Axis.
Journal of Microbiology and Biotechnology 2024
125. Ki-Nam Yoon, Han Gyu Lee, Seo-Joon Yeom, Sang-Su Kim, Jong-Heum Park, Beom-Seok Song, Seung-Won Yi, Yoon Jung Do, Byungkwan Oh, Sang-Ik Oh, Jong-Bang Eun, Seung-Hwan Park, Ju Huck Lee, Hyeun Bum Kim, Ju-Hoon Lee, Tai-Young Hur & Jae-Kyung Kim 
Lactiplantibacillus argentoratensis AGMB00912 alleviates salmonellosis and modulates gut microbiota in weaned piglets: a pilot study
Scientific Reports 2024
124. Hyunok Doo, Jinok Kwak, Gi Beom Keum, Sumin Ryu, Yejin Choi, Juyoun Kang, Haram Kim, Yeongjae Chae, Sheena Kim, Hyeun Bum Kim, Ju-Hoon Lee
Lactic acid bacteria in Asian fermented foods and their beneficial roles in human health
Food Science and Biotechnology 2024
123. Hyunok Doo, Jin Ho Cho, Minho Song, Eun Sol Kim, Sheena Kim, Gi Beom Keum, Jinok Kwak, Sriniwas Pandey, Sumin Ryu, Yejin Choi, Juyoun Kang, Hyeun Bum Kim, Ju-Hoon Lee
Complete genome sequence of Enterococcus faecium strain AJ_C_05 with potential characteristics to break down carbohydrates, applicable to livestock industry
Journal of Animal Science and Technology 2024
122. Sriniwas Pandey, Hyunok Doo, Gi Beom Keum, Eun Sol Kim, Jinok Kwak, Sumin Ryu, Yejin Choi, Juyoun Kang, Sheena Kim, Na Rae Lee, Kwang Kyo Oh, Ju-Hoon Lee, Hyeun Bum Kim
Antibiotic Resistance in Livestock, Environment and Humans: One health perspective
Journal of Animal Science and Technology 2024
121. Eun-Ji Shin, Soo-Jeong Lee, Hoon-Jae Jeong, Ju-Hoon Lee
Development of a novel serogrouping method for the rapid detection of 21 Escherichia coli O-serotypes using multiplex real-time PCR
Food Control 2024
120. San Kim, Se Hyeon Jang, Min Jeong Kim, Jeong Jae Lee, Kyung-Min Kim, Young Hoon Kim, Ju-Hoon Lee, Sung Keun Jung
Hybrid nutraceutical of 2-ketoglutaric acid in improving inflammatory bowel disease: Role of prebiotics and TAK1 inhibitor
Biomedicine & Pharmacotherapy 2024
119. Sumin Ryu, Hyunok Doo, Eun Sol Kim, Gi Beom Keum, Jinok Kwak, Sriniwas Pandey, Yejin Choi, Juyoun Kang, Sheena Kim, Hyeun Bum Kim, Ju-Hoon Lee
Complete genome sequence of Lactiplantibacillus plantarum strain GA_C_14 with potential characteristics applicable in the swine industry
Journal of Animal Science and Technology 2023
118. Ki-Nam Yoon, Soo-Jeong Lee, Gi Beom Keum, Ki-Young Song, Jong-Heum Park, Beom-Seok Song, Seung Yeob Yu, Jae Hyoung Cho, Eun Sol Kim, Hyunok Doo, Jinok Kwak, Sheena Kim, Jong-Bang Eun, Ju Huck Lee, Hyeun Bum Kim, Ju-Hoon Lee
Characteristics of Lactococcus petauri GB97 lysate isolated from porcine feces and its in vitro and in vivo effects on inflammation, intestinal barrier function, and gut microbiota composition in mice
Microbiology Spectrum 2023
117. Eun Sol Kim, Jin Ho Cho, Minho Song, Sheena Kim, Gi Beom Keum, Hyunok Doo, Jinok Kwak, Sriniwas Pandey, Su Min Ryu, Yejin Choi, Juyoun Kang, Hyeun Bum Kim, Ju-Hoon Lee
Genome analysis of Lactococcus taiwanensis strain K_LL001 with potential cellulose degrading functions
Journal of Animal Science and Technology 2023
116. Hyunok Doo, Hyeri Kim, Jin Ho Cho, Minho Song, Eun Sol Kim, Jae Hyoung Cho, Sheena Kim, Gi Beom Keum, Jinok Kwak, Sriniwas Pandey, Hyeun Bum Kim and Ju-Hoon Lee
Complete genome sequence of Lactococcus taiwanensis strain K_LL004, encoding hydrolytic enzymes of plant polysaccharides isolated from grasshopper (Oxya chinensis sinuosa)
J. Anim. Sci. Technol 2023
115. Yeongjin Baek, Soo-Jeong Lee, Jaekun Ryu, Soyeon Jeong, Ju-Hoon Lee, Nam-Chul Ha
Gallic acid inhibits filament formation and promotes the disassembly of superoxide dismutase 1, a protein involved in the pathogenesis of amyotrophic lateral sclerosis
Food Bioscience 2023
114. Chi Rac Hong, Eun Ha Lee, Young Hoon Jung, Ju-Hoon Lee, Hyun-Dong Paik, Sung-Chul Hong and Seung Jun Choi
Development and Characterization of Inula britannica Extract-Loaded Liposomes: Potential as Anti-Inflammatory Functional Food Ingredients
Antioxidants 2023
113. Hyeri Kim, Eun Sol Kim, Jin Ho Cho, Minho Song, Jae Hyoung Cho, Sheena Kim, Gi Beom Keum, Jinok Kwak, Hyunok Doo, Sriniwas Pandey, Seung-Hwan Park, Ju Huck Lee, Hyunjung Jung, Tai Young Hur, Jae-Kyung Kim, Kwang Kyo Oh, Hyeun Bum Kim, and Ju-Hoon Lee
Exploring the Microbial Community and Functional Characteristics of the Livestock Feces Using the Whole Metagenome Shotgun Sequencing
J. Microbiol. Biotechnol. 2023
112. Dong-Geun Park, Joon-Gi Kwon, Eun-Su Ha, Byungcheol Kang, Iseul Choi, Jeong-Eun Kwak, Jinho Choi, Woojung Lee, Seung Hwan Kim, Soon Han Kim, Jeongwoong Park and Ju-Hoon Lee
Novel next generation sequencing panel method for the multiple detection and identification of foodborne pathogens in agricultural wastewater
Front. Microbiol. 2023
111. Hyeon Ji Jeon, Jungyeon Kim, Woo Yeon Seok, Gwang-Seob Kim, Boyoung Choi, Minhye Shin, Ju-Hoon Lee, Younghoon Kim, Jungwoo Yang, Young Hoon Jung
Changes in the metabolome of probiotics during the stationary phase increase resistance to lyophilization
Food Bioscience 2023
110. So-Young Lee, Jihye Yang and Ju-Hoon Lee
Improvement of crAssphage detection/quantification method and its extensive application for food safety
Front. Microbiol 2023
109. Byeong Seob Oh, Seoung Woo Ryu, Seung Yeob Yu, Jeong Eun Bak, Won Jung Choi, Ji-Sun Kim, Jung-Sook Lee, Seung-Hwan Park, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Won Yong Jung, Jo Eun Kim, Yo Han Choi, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee and Ju Huck
Collinsella urealyticum sp. nov., a urease-positive bacterial strain isolated from swine faeces
Arch. Microbiol. 2023
108. Jeong Eun Bak, Byeong Seob Oh, Seoung Woo Ryu, Seung Yeob Yu, Won Jung Choi, Ji-Sun Kim, Jung-Sook Lee, Seung-Hwan Park, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Chan Seok Yun, Won Yong Jung, Jo Eun Kim, Eun Seok Cho, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon
Parabacteroides faecalis sp. nov. Isolated from Swine Faeces
Curr. Microbiol 2023
107. Gi Beom Keum, Eun Sol Kim, Jinho Cho, Minho Song, Kwang Kyo Oh , Jae Hyoung Cho , Sheena Kim , Hyeri Kim , Jinok Kwak , Hyunok Doo , Sriniwas Pandey , Hyeun Bum Kim and Ju-Hoon Lee
Analysis of antibiotic resistance genes in pig feces during the weaning transition using whole metagenome shotgun sequencing
J. Anim. Sci. Technol 2023
106. Ji Young Choi, Gyeongbin Cho, Jam-Eon Park, Seung-Hyeon Choi, Ji-Sun Kim, Jiyoung Lee, Mi-Kyung Lee, Jung-Sook Lee, Ju Huck Lee, Hyeun Bum Kim, Ju-Hoon Lee, Jae-Kyung Kim, Se Won Kang and Seung-Hwan Park
Caproiciproducens faecalis sp. nov., Isolated from Cow Faeces
Curr. Microbiol 2023
105. Hyunok Doo, Hyeri Kim, Jin Ho Cho, Minho Song, Eun Sol Kim, Jae Hyoung Cho, Sheena Kim, Gi Beom Keum, Jinok Kwak, Sriniwas Pandey, Hyeun Bum Kim, Ju-Hoon Lee
Complete genome sequence of Lactococcus taiwanensis strain K_LL004, encoding hydrolytic enzymes of plant polysaccharides isolated from grasshopper (Oxya chinensis sinuosa)
Journal of Animal Science and Technology 2022
104. Hyeri Kim, Eun Sol Kim, Jin Ho Cho, Minho Song, Jae Hyoung Cho, Sheena Kim, Gi Beom Keum, Jinok Kwak, Hyunok Doo, Sriniwas Pandey, Seung-Hwan Park, Ju Huck Lee, Hyunjung Jung, Tai Young Hur, Jae-Kyung Kim, Kwang Kyo Oh, Hyeun Bum Kim, and Ju-Hoon Lee
Exploring the Microbial Community and Functional Characteristics of the Livestock Feces Using the Whole Metagenome Shotgun Sequencing
Journal of Microbiology and Biotechnology 2022
103. Ji Young Choi​, Jam-Eon Park​, Seung-Hyeon Choi​, Ji-Sun Kim​, Jung-Sook Lee​, Ju Huck Lee​, Hyeun Bum Kim​, Ju-Hoon Lee​, Jae-Kyung Kim​, Se Won Kang and Seung-Hwan Park​
Succinivibrio faecicola sp. nov., isolated from cow faeces
Int. J. Syst. Evol. Microbiol. 2022
102. Dong-Geun Park, Eun-Su Ha, Byungcheol Kang, Iseul Choi, Jeong-Eun Kwak, Jinho Choi, Jeongwoong Park, Woojung Lee, Seung Hwan Kim, Soon Han Kim, and Ju-Hoon Lee1
Development and Evaluation of a Next-Generation Sequencing Panel for the Multiple Detection and Identification of Pathogens in Fermented Foods
J. Microbiol. Biotechnol. 2023
101. Park NJ, Kwon JG, Na HG, Lee SH, Lee JH, Ryu SR
Discovery and Characterization of a New Genotype of Salmonella enterica serovar Bareilly Isolated from Diarrhea Patients of Food-borne Outbreaks
Front. Microbiol. 2022
100. Kwon JG, Park SH, Kwak JE, Cho JH, Kim GY, Lee DB, Kim DH, Kim HB, Lee JH
Mouse feeding study and microbiome analysis of sourdough bread for evaluation of its health effects
Front. Microbiol. 2022
99. Im HY, Lee JH, Choi SH
Independent Component Analysis Identifies the Modulons Expanding the Transcriptional Regulatory Networks of Enterohemorrhagic Escherichia coli
Front. Microbiol. 2022
98. Kim YT, Kim CH, Kwon JG, Cho JH, Shin YS, Kim HB, Lee JH
In vivo Trial of Bifidobacterium longum Revealed the Complex Network Correlations Between Gut Microbiota and Health Promotional Effects
Front. Microbiol. 2022
97. Guan Y, Li Z, Kim MJ, Lee JY, Choe H, Park SH, Kang SW, Lee JY, Lee JH, Kim HB, Lee JH, Kim EJ, Lee MK
Olsenella intestinalis sp. nov., isolated from cow feces
Arch Microbiol 2022
96. Lee SM, An JU, Woo JH, Song HK, Yi SH, Kim WH, Lee JH, Ryu SR, Cho SB
Prevalence, Characteristics, and Clonal Distribution of Escherichia coli Carrying Mobilized Colistin Resistance Gene mcr-1.1 in Swine Farms and Their Differences According to Swine Production Stages
Front. Microbiol. 2022
95. Kim HR, Cho JH, Song MH, Cho JH, Kim S, Kim ES, Keum GB, Kim HB, Lee JH
Evaluating the Prevalence of Foodborne Pathogens in Livestock Using Metagenomics Approach
J. Microbiol. Biotechnol. 2021
94. Oh BS, Kim JS, Ryu SW, Yu SY, Lee JS, Park SH, Kang SW, Lee JY, Lee MK, Lee KH, Jung WY, Jung HJ, Hur TY, Kim HB, Kim JK, Lee JH, Jeong JH, Lee JH
Faecalicatena faecalis sp. nov., a moderately alkaliphilic bacterial strain isolated from swine faeces
Anton. Leeuw. 2021
93. Choi SH, Park JE, Choi JY, Kim JS, Kang SW, Lee JY, Lee MK, Lee JS, Lee JH, Jung HJ, Hur TY, Kim HB, Lee JH, Kim JK, Park SH
Anaerosporobacter faecicola sp. nov. isolated from faeces of Korean cow
Int. J. Syst. Evol. Microbiol. 2021
92. Choi JY, Choi SH, Park JE, Kim JS, Lee JY, Lee MK, Lee JS, Lee JH, Jung HJ, Hur TY, Kim HB, Lee JH, Kim JK, Kang SW, Park SH
Phocaeicola faecicola sp. nov., isolated from porcine faeces
Int. J. Syst. Evol. Microbiol. 2021
91. Choi SH, Choi JY, Park JE, Kim JS, Kang SW, Lee JY, Lee MK, Lee JS, Lee JH, Jung HJ, Hur TY, Kim HB, Lee JH, Kim JK, Hong YJ, Park SH
Description of Anaerostipes faecalis sp. nov., a new segmented filamentous bacterium isolated from swine faeces
Antonie Van Leeuwenhoek 2021
90. Ryu SW, Kim JS, Oh BS, Yu SY, Lee JS, Park SH, Kang SW, Lee JY, Lee MK, Rhee MS, Jung HJ, Hur TY, Kim HB, Kim JK, Lee JH, Lee JH
Peptoniphilus faecalis sp. nov., isolated from swine faeces
Int. J. Syst. Evol. Microbiol. 2021
89. Yu SY, Oh BS, Ryu SW, Kim JS, Lee JS, Park SH, Kang SW, Lee JY, Lee MK, Choe H, Jung WY, Jung HJ, Hur TY, Kim HB, Kim JK, Lee JH, Lee JH
Anaerococcus faecalis sp. nov., Isolated from Swine Faeces
Curr. Microbiol 2021
88. Cho JH, Kwon JG, Ryu SR, O’Sulivan JD, Lee JH
Development of an endolysin enzyme and its cell wall-binding domain (CBD) protein, and their applications for biocontrol and rapid detection of Clostridium perfringens in food
Food Chem 2021
87. Kim HJ, Kim YT, Kim HB, Choi SH, Lee JH
Characterization of Bacteriophage VVP001 and Its Application for the Inhibition of vulnificus Causing Seafood-borne disease
Food Microbiol 2021
86. Chung HY, Kim YT, Kwon JG, Im HY, Ko DH, Lee JH, Choi SH
Molecular interaction between methicillin-resistant Staphylococcus aureus (MRSA) and chicken breast reveals enhancement of pathogenesis and toxicity for food-borne outbreak
Food Microbiol 2021
85. Kim H, Cho JH, Cho JH, Song M, Shin H, Kim S, Kim ES, Kim HB, Lee JH
Complete genome sequence of Escherichia coli K_EC180, a bacterium producing shiga-like toxin isolated from swine feces
J. Anim. Sci. Technol. 63(2):461-464 2021
84. Kim SY, Chung HY, Kwon JG, Choi SH, Lee JH
Fresh Crab Plays an Important Role as a Nutrient Reservoir for the Rapid Propagation of Vibrio vulnificus
Front. Microbiol. 12:645860 2021
83. Jiang L, Jung WY, Li Z, Lee MK, Park SH, Kang SW, Lee JS, Jung H, Hur TY, Kim HB, Kim JK, Lee JH, Lee JH, Lee J
Peribacillus faecalis sp. nov., a moderately halophilic bacterium isolated from the faeces of a cow
Int. J. Syst. Evol. Microbiol. 71(3):004721 2021
82. Kim H, RB Guevarra, Cho JH, Kim HB, Lee JH
Complete genome sequence of Lactococcus lactis strain K_LL005, a xylose-utilizing bacterium isolated from grasshopper (Oxya chinensis sinuosa)
J. Anim. Sci. Technol. 63(1):191 2021
81. Kim H, Cho JH, Cho JH, Song MH, Song M, Shin H, Kim S, Kim ES, Kim HB, Lee JH
Complete genome sequence of Salmonella enterica strain K_SA184, multidrug resistance bacterium isolated from lamb (Ovis aries)
J Anim Sci Technol. 63(1):194-197 2021
80. Cho JH, Kwon JG, Ryu SR, O’Sulivan JD, Lee JH
Development of an endolysin enzyme and its cell wall-binding domain (CBD) protein, and their applications for biocontrol and rapid detection of Clostridium perfringens in food
Food Chem. 345:128562 2020
79. Kim HJ, Kim YT, Kim HB, Choi SH, Lee JH
Characterization of a Novel Bacteriophage and Its Food Application for Inhibition of a Food-borne Pathogen Vibrio vulnificus
Food Microbiol. 94:103630 2020
78. Chung HY, Kim YT, Kwon JG, Im HY, Ko DH, Lee JH, Choi SH
Molecular interaction between methicillin-resistant Staphylococcus aureus (MRSA) and chicken breast reveals enhancement of pathogenesis and toxicity for food-borne outbreak
Food Microbiol 93: 103602 2020
77. Park IJ, Lee JH, Kye BY, Oh HK, Cho YB, Lee IK et al
Effects of PrObiotics on the Symptoms and Surgical ouTComes after Anterior Resection of Colon Cancer (POSTCARE): A Randomized, Double-Blind, Placebo-controlled Trial
J. Clin. Med. 9(7):2181 2020
76. Oh NS, Lee JY, Kim YT, Kim SH, Lee JH
Cancer-protective effect of a synbiotic combination of Lactobacillus gasseri 505 and Cudrania tricuspidata leaf extract on colitis-associated colorectal cancer
Gut Microbes 12(1):1785803 2020
75. Ku HJ, Kim YT, and Lee JH
Microbiome Study of Initial Gut Microbiota from Newborn Infants to Children Reveals that Diet Determines Its Compositional Development
J. Microbiol. Biotechnol. 30(7):1067-1071 2020
74. Kim SK, Guevarra RB, Kim YT, Kwon JG, Kim HR, Cho JH, Kim HB, Lee JH
Role of probiotics in human gut microbiome-associated diseases
J. Microbiol. Biotechnol. 29(9):1335-1340 2019
73. Park JS, Guevarra RB, Kim BR, Lee JH, Lee SH, Cho JH, Kim HR, Cho JH, Song MH, Lee JH, Isaacson RE, Song KH, Kim HB
Intestinal Microbial Dysbiosis in Beagles Naturally Infected with Canine Parvovirus
J. Microbiol. Biotechnol. 29(9):1391-1400 2019
72. Chang YJ, Bai JW, Lee JH, Ryu SR
Mutation of a Staphylococcus aureus temperate bacteriophage to a virulent one and evaluation of its application
Food Microbiol. 82:523-532 2019
71. Park CY, Kong MS, Lee JH, Ryu, SR, Park SS
Detection of Bacillus Cereus Using Bioluminescence Assay with Cell Wall-binding Domain Conjugated Magnetic Nanoparticles
BioChip J. 12(4):287-293 2018
70. Kim JI, Lee JH, Song YJ, Lee YH, Kang H
Oral consumption of cinnamon enhances the expression of immunity and lipid absorption genes in the small intestinal epithelium and alters the gut microbiota in normal mice
J. Functional Foods. 49:96-10 2018
69. Yi DH, Kim YT, Kim CH, Shin YS, Lee JH
Isolation and Characterization of Bifidobacterium longum subsp. longum BCBR-583 for Probiotic Applications in Fermented Foods
J Microbiol Biotechnol. 28(11):1846-1849 2018
68. Chung HY, Lee B, Na EJ, Lee KH, Ryu S, Yoon H, Lee JH, Kim HB, Kim H, Jeong HG, Kim BS, Choi SH
Potential Survival and Pathogenesis of a Novel Strain, Vibrio parahaemolyticus FORC_022, Isolated From a Soy Sauce Marinated Crab by Genome and Transcriptome Analyses
Front. Microbiol. 9:1504 2018
67. Yuk KJ, Kim YT, Huh CS, Lee JH
Lelliottia jeotgali sp. nov., isolated from a traditional Korean fermented clam
Int J Syst Evol Microbiol. 68(5):1725-1731 2018
66. Kim D, Hong S, Na H, Chun J, Guevarra RB, Kim YT, Ryu S, Kim HB, Lee JH
Analysis of Microbiota in Bellflower Root, Platycodon grandiflorum, Obtained from South Korea
J Microbiol Biotechnol. 28(4):551-560 2018
65. Kim D, Hong S, Kim YT, Ryu S, Kim HB, Lee JH
Metagenomic Approach to Identifying Foodborne Pathogens on Chinese Cabbage
J Microbiol Biotechnol. 28(2):227-235 2018
64. Choi IY*, Lee JH*, Kim HJ, Park MK
Isolation and Characterization of a Novel Broad-host-range Bacteriophage Infecting Salmonella enterica subsp. enterica for Biocontrol and Rapid Detection
J Microbiol Biotechnol. 27(12):2151-2155 2017
63. Kim BR, Shin J, Guevarra R, Lee JH, Kim DW, Seol KH, Lee JH, Kim HB, Isaacson R
Deciphering Diversity Indices for a Better Understanding of Microbial Communities
J Microbiol Biotechnol. 27(12):2089-2093 2017
62. Koo HJ, Ahn S, Chung HY, Kim S, Kim K, Ryu S, Lee JH, Choi SH, Kim H
Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013
Gut Pathog. 9:29 2017
61. Ku HJ, Kim YT, Lee JH
Genomic Insights of Weissella jogaejeotgali FOL01(T) Reveals Its Food Fermentation Ability and Human Gut Adaptive Potential for Probiotic Applications in Food Industries
J Microbiol Biotechnol. 27(5):943-946 2017
60. Kim S, Kim YT, Yoon H, Lee JH, Ryu S
The complete genome sequence of Cronobacter sakazakii ATCC 29544(T), a food-borne pathogen, isolated from a child's throat
Gut Pathog. 9:2 2017
59. Park EA, Kim YT, Cho JH, Ryu S, Lee JH
Characterization and genome analysis of novel bacteriophages infecting the opportunistic human pathogens Klebsiella oxytoca and K. pneumoniae
Arch Virol. 162(4):1129-1139 2017
58. Gnanasekaran G, Na EJ, Chung HY, Kim S, Kim YT, Kwak W, Kim H, Ryu S, Choi SH, Lee JH
Genomic Insights and Its Comparative Analysis with Yersinia enterocolitica Reveals the Potential Virulence Determinants and Further Pathogenicity for Foodborne Outbreaks
J Microbiol Biotechnol. 27(2):262-270 2017
57. Lee H, Ku HJ, Lee DH, Kim YT, Shin H, Ryu S, Lee JH
Characterization and Genomic Study of the Novel Bacteriophage HY01 Infecting Both Escherichia coli O157:H7 and Shigella flexneri: Potential as a Biocontrol Agent in Food
PLoS One. 11(12):e0168985 2016
56. Ahn S, Chung HY, Lim S, Kim K, Kim S, Na EJ, Caetano-Anolles K, Lee JH, Ryu S, Choi SH, Kim H
Complete genome of Vibrio parahaemolyticus FORC014 isolated from the toothfish
Gut Pathog. 8:59 2016
55. Chung HY, Lee KH, Ryu S, Yoon H, Lee JH, Kim HB, Kim H, Jeong HG, Choi SH, Kim BS
Genome Sequence of Bacillus cereus FORC_021, a Food-Borne Pathogen Isolated from a Knife at a Sashimi Restaurant
J Microbiol Biotechnol. 26(12):2030-2035 2016
54. Han Young Chung, You-Tae Kim, Suyeon Kim, Eun Jung Na, Hye-Jin Ku, Keun Hwa Lee, Sang Taek Heo, Sangryeol Ryu, Heebal Kim, Sang Ho Choi, and Ju-Hoon Lee
Complete genome sequence of Vibrio vulnificus FORC_017 isolated from a patient with a hemorrhagic rash after consuming raw dotted gizzard shad
Gut Pathog. 8:22 2016
53. Suyeon Kim, Han-Young Chung, Dong-Hoon Lee, Jong Gyu Lim, Se Keun Ki, Hye-Jin Ku, You-Tae Kim, Heebal Kim, Sangryeol Ryu, Ju-Hoon Lee*, and Sang Ho Choi
Complete genome sequence of Vibrio parahaemolyticus strain FORC_008, a foodborne pathogen from a flounder fish in South Korea
Pathog. Dis. 74(4):ffw044 2016
52. Jaewoo Bai, You-Tae Kim, Sangryeol Ryu, and Ju-Hoon Lee
Biocontrol and Rapid Detection of Food-Borne Pathogens Using Bacteriophages and Endolysins
Front. Microbiol. 7:474 2016
51. Han-Young Chung, Eun-Jung Na, Kyu-Ho Lee, Sangryeol Ryu, Hyunjin Yoon, Ju-Hoon Lee, Hyuen Bum Kim, Heebal Kim, Sang Ho Choi, and Bong-Soo Kim
Genome sequence of Vibrio parahaemolyticus FORC_023 isolated from raw fish storage water
Pathog. Dis. 74(4):ffw032 2016
50. Ju-Hoon Lee, Jaewoo Bai, Hakdong Shin, Yeran Kim, Bookyung Park, Sunggi Heu, and Sangryeol Ryu
A Novel Bacteriophage Targeting Cronobacter sakazakii is a Potential Biocontrol Agent in Foods
Appl. Environ. Microbiol. 82(1):192-201 2016
49. Dong-Hoon Lee, Hye Rim Kim, Han Young Chung, Jong Gyu Lim, Suyeon Kim, Se Keun Kim, Hye-Jin Ku, Heebal Kim, Sangryeol Ryu, Sang Ho Choi, and Ju-Hoon Lee
Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
Stand. Genomic. Sci. 10:97 2015
48. Yoon-Jee Chang, Hakdong Shin, Ju-Hoon Lee, Chul Jong Park, Soon-Young Paik, and Sangryeol Ryu
Isolation and Genome Characterization of the Virulent Staphylococcus aureus Bacteriophage SA97
Viruses. 7(10):5225-5242 2015
47. Se-Hui Lee, Hye-Jin Ku, Min-Ju Ahn, Ji-Sang Hong, Se-Hee Lee, Hakdong Shin, Keun Cheol Lee, Jeong-Sook Lee, Sangryeol Ryu, Che Ok Jeon, and Ju-Hoon Lee
Isolation of Weissella jogaejeotgali sp. nov. from Jogaejeotgal, a Traditional Korean Fermented Seafood
Int. J. Syst. Evol. Microbiol. 65:4674-4681 2015
46. Min-Ju Ahn, Hye-Jin Ku, Se-Hui Lee, and Ju-Hoon Lee
Characterization of a Novel Fibrinolytic Enzyme BsfA from Bacillus subtilis ZA400 in Kimchi Reveals Its Pertinence to the Thrombosis Treatment
J. Microbiol. Biotechnol. 25(12):2090-2099 2015
45. Sooyeon Lim, SooHyun Cho, Kelsey Caetano-Anolles, Seok Geun Jeong, Mi Hwa Oh, Beom Young Park, Hyun Jung Kim, Seoae Cho, Sang Ho Choi, Sangryeol Ryu, Ju-Hoon Lee, Heebal Kim, Jun Sang Ham
Developmental Dynamic Analysis of the Excreted Microbiome of Chickens Using Next-Generation Sequencing
J. Mol. Microbiol. Biotechnol. 25(4):262-268 2015
44. Se-Hui Lee, Min-Ju Ahn, Ji-Sang Hong, and Ju-Hoon Lee
Diversity and community analysis of fermenting bacteria isolated from eight major Korean fermented foods using arbitrary-primed PCR and 16S rRNA gene sequencing
J. Korean Soc. Appl. Biol. Chem. 58(3):453-461 2015
43. Hye-Jin Ku, Myeong Soo Park, and Ju-Hoon Lee
Characterization of a minimal pKW2124 replicon from Weissella cibaria KLC140 and its application for the construction of the Weissella expression vector pKUCm1
Front. Microbiol. 6:35 2015
42. Sooyeon Lim, Dong-Hoon Lee, Woori Kwak, Hakdong Shin, Hye-Jin Ku, Jong-eun Lee, Gun Eui Lee, Heebal Kim, Sang-Ho Choi, Sangryeol Ryu, and Ju-Hoon Lee
Comparative Genomic Analysis of Staphylococcus aureus FORC_001 and S. aureus MRSA252 Reveals the Characteristics of Antibiotic Resistance and Virulence Factors for Human Infection
J. Microbiol. Biotechnol. 25(1):98-108 2015
41. Myo-Deok Kim, Dong-Ho Seo, Jong-Hyun Jung, Dong-Hyun Jung, Min-Ho Joe, Sang-Yong Lim, Ju-Hoon Lee, and Cheon-Seok Park
Molecular Cloning and Expression of Amylosucrase from Highly Radiation-resistant Deinococcus radiopugnans
Food. Sci. Biotechnol. 23(6):2007-2012 2014
40. Jeong-A Lim, Hakdong Shin, Dong Hwan Lee, Sang-Wook Han, Ju-Hoon Lee, Sangryeol Ryu, and Sunggi Heu
Complete genome sequence of the Pectobacterium carotovorum subsp. carotovorum virulent bacteriophage PM1
Arch. Virol. 159(8):2185-2187 2014
39. Hye-Jin Ku and Ju-Hoon Lee
Development of a Novel Long-Range 16S rRNA Universal Primer Set for the Metagenomic Analysis of Gastrointestinal Microbiota in Newborn Infants
J. Microbiol. Biotechnol. 24(6):812-822 2014
38. Ju-Hoon Lee, Hakdong Shin, Hye-Jee Park, Sangryeol Ryu, and Sang-Wook Han
Draft genome sequence of Xanthomonas axonopodis pv. glycines 8ra possessing transcription activator-like effectors used for genetic engineering
J. Biotechnol. 179:15-16 2014
37. Hakdong Shin*, Ju-Hoon Lee*, Jaeeun Park, Sunggi Heu, and Sangryeol Ryu(*Co-first authors)
Characterization and Comparative Genome Analysis of Bacillus cereus-specific Bacteriophage BPS10C and BPS13 with Strong Lytic Activities
Arch. Virol. 159(8):2171-2175 2014
36. Ju-Hoon Lee, Hakdong Shin, Sangryeol Ryu
Characterization and comparative genomic analysis of bacteriophages infecting members of the Bacillus cereus group
Arch. Virol. 159(5):871-874 2014
35. Jong-Hyun Jung, You-Tae Kim, Eun-Jung Jeon, Dong-Ho Seo, Sarah A. Hensley, James F. Holden, Ju-Hoon Lee, and Cheon-Seok Park
Complete genome sequence of hyperthermophilic archaeon Thermococcus sp. ES1
J. Biotechnol. 174(20):14-15 2014
34. Hakdong Shin*, Ju-Hoon Lee*, Chi Sang Ahn, Sangryeol Ryu, and Byung Cheol Cho(*Co-first authors)
Complete Genome Seauence of Marine Bacterium Pseudoalteromonas phenolica Bacteriophage TW1
Arch. Virol. 159(1):159-162 2014
33. Hyun Sung Lee, Slae Choi, Hakdong Shin, Ju-Hoon Lee* and Sang Ho Choi*(*Co-corresponding authors)
Vibrio vulnificus Bacteriophage SSP002 as a Possible Biocontrol Agent
Appl. Environ. Microbiol. 80(2):515-524 2014
32. Hakdong Shin, Ju-Hoon Lee, Hyunjin Yoon, Dong-Hyun Kang and Sangryeol Ryu
Genomic Investigation of Lysogen Formation and Host Lysis Systems of the Salmonella Temperate Bacteriophage SPN9CC
Appl. Environ. Microbiol. 80(1):374-384 2014
31. Youn Ho Choi, Hakdong Shin, Ju-Hoon Lee, and Sangryeol Ryu
Identification and characterization of a novel flagellum-dependent Salmonella-infecting bacteriophage, iEPS5
Appl. Environ. Microbiol. 79(16):4829-4837 2013
30. Han Seung Chae, Jeong Min Lee, Ju-Hoon Lee, and Pyung Cheon Lee
Isolation and Characterization of a Cryptic Plasmid, pMBLR00, from Leuconostoc mesenteroides subsp. mesenteroides KCTC 3733
J. Microbiol. Biotechnol. 23(6):837-842 2013
29. Yoonjee Chang*, Ju-Hoon Lee*, Hakdong Shin, and Sangryeol Ryu
Characterization and Complete Genome Sequence Analysis of Staphylococcus aureus Bacteriophage SA12
Virus Genes. 47(2):389-393. (*Co-first authors) 2013
28. Ju-Hoon Lee*, Hakdong Shin*, Younho Choi, and Sangryeol Ryu
Complete Genome Sequence Analysis of Bacterial Flagellum-Targeting Bacteriophage Chi
Arch. Virol. 158(10):2179-2183 2013
27. Ju-Hoon Lee*, Hakdong Shin*, Bokyung Son, and Sangryeol Ryu
Characterization and complete genome sequence of a virulent bacteriophage B4 infecting food-borne pathogenic Bacillus cereus
Arch. Virol. 158(1):2101-2108 2013
26. Soo-Young Kim, Chang-Geun Oh, Young-Joo Lee, Kyu-Ha Choi, Doo-Sik Shin, Si-Kyung Lee, Kab-Joo Park, Hakdong Shin, Myeong-Soo Park, and Ju-Hoon Lee
Sequence Analysis of a Cryptic Plasmid pKW2124 from Weissella cibaria KLC140 and Construction of a Surface Display Vector
J. Microbiol. Biotechnol. 23(4):545-554 2013
25. Han-Seung Chae, Seung-Hwan Lee, Ju-Hoon Lee, Si-Jae Park, and Pyung-Cheon Lee
Metabolic Engineering to Overproduce D-Lactate by Leuconostoc citreum using a Novel E. coli-Leuconostoc Shuttle Vector
Appl. Environ. Microbiol. 79(5):1428-1435 2013
24. Evelien M. Adriaenssens, Hans-Wolfgang Ackermann, Hany Anany, Bob Blasdel, Ian F. Connerton, David Goulding, Mansel W. Griffiths, Steven P. Hooton, Elizabeth M. Kutter, Andrew M. Kropinski, Ju-Hoon Lee, Martine Maes, Derek Pickard, Sangryeol Ryu, Zargham
A suggested new bacteriophage genus: ''Viunalikevirus''
Arch. Virol. 157(10):2035-2046 2012
23. Dong-Hwan Lee*, Ju-Hoon Lee*, Hakdong Shin, Samnyu Ji, Eunjung Roh, Kyusuk Jung, Sangryeol Ryu, Jaehyuk Choi, and Sunggi Heu(*Co-first authors)
Complete genome sequence of Pectobacterium carotovorum subsp. carotovorum bacteriophage My1
J. Virol. 86(20):11410-11411 2012
22. Hakdong Shin*, Ju-Hoon Lee*, Hyeryen Kim, Younho Choi, Sunggi Heu, and Sangryeol Ryu(*Co-first authors)
Receptor Diversity and Host Interaction of Bacteriophage Infecting Salmonella enterica serovar Typhimurium
PLoS One. 7(8):e43392 2012
21. Jong-Hyun Jung, James F. Holden, Dong-Ho Seo, Hakdong Shin, Sangryeol Ryu, Ju-Hoon Lee*, and Cheon-Seok Park*(*Co-corresponding authors)
Complete Genome Sequence of the Hyperthermophilic Archaeon Thermococcus sp. Strain CL1 Isolated from a Paralvinella sp. Hydrothermal Vent Polychaete Worm
J. Bacteriol. 194(17):4769-4770 2012
20. Ju-Hoon Lee, Hakdong Shin, Samnyu Ji, Shweta Malhotra, Mukesh Kumar, Sangryeol Ryu, and Sunggi Heu
Complete Genome Sequence of Phytopathogenic Pectobacterium carotovorum subsp. carotovorum Bacteriophage PP1
J. Virol. 86(16):8899-8900 2012
19. Hakdong Shin*, Ju-Hoon Lee*, Younho Choi, and Sangryeol Ryu(*Co-first authors)
Complete Genome Sequence of the Opportunistic Food-Borne Pathogen Cronobacter sakazakii ES15
J. Bacteriol. 194(16):4438-4439 2012
18. Jong-Hyun Jung*, Ju-Hoon Lee*, James F. Holden, Dong-Ho Seo, Hakdong Shin, Hae-Young Kim, Wooki Kim, Sangryeol Ryu, and Cheon-Seok Park(*Co-first authors)
Complete Genome Sequence of the Hyperthermophilic Archaeon Pyrococcus sp. Strain ST04, Isolated from a Deep-Sea Hydrothermal Sulfide Chimney on the Juan de Fuca Ridge
J. Bacteriol. 194(16):4434-4435 2012
17. Ju-Hoon Lee, Younho Choi, Hakdong Shin, Junghyun Lee, and Sangryeol Ryu
Complete Genome Sequence of Cronobacter sakazakii Temperate Bacteriophage phiES15
J. Virol. 86(14):7713-7714 2012
16. Hakdong Shin*, Ju-Hoon Lee*, Yeran Kim and Sangryeol Ryu(*Co-first authors)
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage CR3
J. Virol. 86(11):6367-6368 2012
15. Ju-Hoon Lee, Hakdong Shin, and Sangryeol Ryu
Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Bacteriophage SPN3UB
J. Virol. 86(6):3404-3405 2012
14. Hakdong Shin*, Ju-Hoon Lee*, Jeong-A Lim, Hyeryen Kim, and Sangryeol Ryu(*Co-first authors)
Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Bacteriophage SPN1S
J. Virol. 86(2):1284-1285 2012
13. Ju-Hoon Lee, Hakdong Shin, Bokyung Son, and Sangryeol Ryu
Complete Genome Sequence of Bacillus cereus Bacteriophage BCP78
J. Virol. 86(1):637-638 2012
12. Minjung Park*, Ju-Hoon Lee*, Hakdong Shin, Minsik Kim, Jeongjoon Choi, Dong-Hyun Kang, Sunggi Heu, and Sangryeol Ryu(*Co-first authors)
Characterization and Comparative Genomic Analysis of a Novel Bacteriophage, SFP10, Simultaneously Inhibiting both Salmonella enterica and Escherichia coli O157:H7
Appl. Environ. Microbiol. 78(1):58-69 2012
11. Ju-Hoon Lee, Hakdong Shin, Hyeryen Kim, and Sangryeol Ryu
Complete Genome Sequence of Salmonella Bacteriophage SPN3US
J. Virol. 85(24):13470-13471 2011
10. Ju-Hoon Lee, Xiulan Li and Daniel J. O'Sullivan
Transcription Analysis of a Lantibiotic Gene Cluster from Bifidobacterium longum DJO10A
Appl. Environ. Microbiol. 77(17):5879-5887 2011
9. Ju-Hoon Lee and Daniel J. O'Sullivan
Genomic Insights into Bifidobacteria
Microbiol. Mol. Biol. Rev. 74(3):378-416 2010
8. Ju-Hoon Lee, V.N. Karamychev, S.A. Kozyavkin, D. Mills, A.R. Pavlov, N.V. Pavlova, N.N. Polouchine, P.M. Richardson, V.V. Shakhova, A.I. Slesarev, B. Weimer and D.J. O’Sullivan
Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth
BMC Genomics. 9:247 2008
7. Ju-Hoon Lee, Jamie S. Halgerson, Jeong-Hwan Kim and Daniel J. O’Sullivan
Comparative Sequence Analysis of Plasmids from Lactobacillus delbrueckii and Construction of a Shuttle Cloning Vector
Appl. Environ. Microbiol. 73(14):4417-4424 2007
6. K. Makarova, A. Slesarev, Y. Wolf, A. Sorokin, B. Mirkin, E. Koonin, A. Pavlov, N. Pavlova, V. Karamychev, N. Polouchine, V. Shakhova, I. Grigoriev, Y. Lou, D. Rohksar, S. Lucas, K. Huang, D. M. Goodstein, T. Hawkins, V. Plengvidhya, D. Welker, J. Hugh
Comparative genomics of the lactic acid bacteria
Proc. Natl. Acad. Sci. U.S.A. 103(42):15611-15616 2006
5. Ha-Kun Kim, Dae-Sik Chun, Joon-Sik Kim, Cheol-Ho Yun, Ju-Hoon Lee, Soon-Kwang Hong, Dae-Kyung Kang
Expression of the cationic antimicrobial peptide lactoferricin fused with the anionic peptide in Escherichia coli
Appl. Microbiol. Biotechnol. 72:330-338 2006
4. Ju-Hoon Lee and Daniel J. O’Sullivan
Sequence Analysis of Two Cryptic Plasmids from Bifidobacterium longum DJO10A and Construction of a Shuttle Cloning Vector
Appl. Environ. Microbiol. 72(1):527-535 2006
3. Marco Ventura, Ju-Hoon Lee, Carlos Canchaya, Ralf Zink, S. Leahy, J. A. Moreno-Munoz, M. O’Connell-Motherway, D. Higgins, Gerald F. Fitzerald, Daniel J. O’Sullivan and Douwe van Sinderen
Prophage-Like Elements in Bifidobacteria: Insights from Genomics, Transcription, Integration, Distribution, and Phylogenetic Analysis
Appl. Environ. Microbiol. 71(12):8692-8705 2005
2. Sang-Suk Kim, Ju-Hoon Lee, Yong-Sun Ahn, Jung-Hoan Ki and Dae-Kyung Kang
A Fibrinolytic Enzyme from Bacillus amyloliquefaciens D4-7 Isolated from Chungkook-jang: It’s Characterization and Influence of Additives on Thermostability
Kor. J. Microbiol. Biotechnol. 31(3):271-276 2003
1. Ju-Hoon Lee, Myeong-Soo Park, Ke-Ho Lee and Geun-Eog Ji
Characterization of Plasmids from Bifidobacterium sp.
J. Microbiol. Biotechnol. 11(1):1-6 2001